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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1353058 chr8:71922018 C/T XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs1359182 chr13:43603093 A/G DNAJC15 chr13:43597339-43688360:+ 0.75 5.41 1.62E-6 Box Plot
ACC rs1363907 chr5:96252803 G/A ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs1363908 chr5:96253104 T/C ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs1363974 chr5:96293816 A/G ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs1367223 chr2:175391970 A/C SCRN3 chr2:175260458-175294303:+ 0.54 5.68 6.16E-7 Box Plot
ACC rs1371410 chr11:74725298 G/A XRRA1 chr11:74518784-74660245:- 0.69 5.49 1.21E-6 Box Plot
ACC rs1373060 chr11:60173847 C/T MS4A14 chr11:60146003-60185229:+ 0.37 5.48 1.24E-6 Box Plot
ACC rs1373480 chr8:71686967 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs138072589 chr14:65388188 CAAAAT/C CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs138459924 chr7:97408621 C/T TECPR1 chr7:97843936-97881563:- 0.92 5.92 2.57E-7 Box Plot
ACC rs1389202 chr8:71852285 C/T XKR9 chr8:71581600-71702606:+ 0.68 6.95 6.06E-9 Box Plot
ACC rs1389204 chr8:71928298 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs1389206 chr8:71924862 A/G XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs138969068 chr7:64949059 C/A INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.79E-6 Box Plot